forked from kamba4/sunders
moved persistence
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3 changed files with 7 additions and 7 deletions
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@ -28,5 +28,5 @@ cat seq_list.txt | xargs -n1 -P10 -I{} bash -c '
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path=$(echo "$f" | sed -E "s#(...)(...)(...)#\1/\2/\3#")
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url="${REPLICATE_URL}/${path}.osc.gz"
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echo "Downloading $url"
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curl -sL "$url" -o "${seqnum}.osc.gz" && gunzip "${seqnum}.osc.gz" && python filter_osc.py ${seqnum} && rm ${seqnum}.osc
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curl -sL "$url" -o /migrations/"${seqnum}.osc.gz" && gunzip /migrations/"${seqnum}.osc.gz" && python filter_osc.py ${seqnum} && rm /migrations/${seqnum}.osc
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' _ {}
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